Index

_

__init__() (crn.Expression method) (crn.Reaction method) (crn.Specie method)

C

concentration_to_count() (in module crn) crn module

crn_to_odes() (in module crn)

E

empty (in module crn)

Expression (class in crn)

F

f() (crn.Reaction method)

G

get_ode() (crn.Reaction method)

get_species() (crn.Expression method) (crn.Reaction method)

I

i() (crn.Reaction method) inhibitors (crn.Reaction attribute) integrate_crn_odes() (in module crn)

integrate_odes() (in module ode) is_bimolecular() (crn.Reaction method) is_conservative() (crn.Reaction method) is_unimolecular() (crn.Reaction method)

K

k() (crn.Reaction method)

M

module crn ode

N

num_inhibitors() (crn.Reaction method)

num_products() (crn.Reaction method) num_reactants() (crn.Reaction method)

O

ode module

P

plot() (in module ode) plot_crn() (in module crn) product_if_unique() (crn.Reaction method)

product_names_if_exactly_two() (crn.Reaction method) products (crn.Reaction attribute) products_if_exactly_two() (crn.Reaction method)

R

r() (crn.Reaction method) rate_constant (crn.Reaction attribute) rate_constant_reverse (crn.Reaction attribute) reactant_if_unimolecular() (crn.Reaction method) reactant_names_if_bimolecular() (crn.Reaction method)

reactants (crn.Reaction attribute) reactants_if_bimolecular() (crn.Reaction method) Reaction (class in crn) replace_reversible_rxns() (in module crn) reversible (crn.Reaction attribute)

S

Specie (class in crn) species (crn.Expression attribute)

species() (in module crn) symmetric() (crn.Reaction method) symmetric_products() (crn.Reaction method)

W

with_inhibitor() (crn.Reaction method)